Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq29751 86.0 5e-12 >seq29751 Length=8246 Score = 86.0 bits (94), Expect = 5e-12 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 33904 CCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-A 33962 || ||||| |||||||| || || || ||| ||||||||||||||||| || | || | Sbjct 1 CCCCTCAGGCGCAGCACAAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGA 60 Query 33963 TTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || ||| | || |||| |||||||| ||||| ||||| | ||||||||| Sbjct 61 GTG-CGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATC 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396752778433564