Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq30096 82.4 9e-11 >seq30096 Length=29002 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 |||||| || || ||||| | ||||||||||||| ||| | || ||||| || Sbjct 17502 CTCATCTTTGCTGGTATACTCCACTATTTCCGTACACAGATTGCTGCATTTGATGGTCCC 17561 Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618 |||||||| ||||| ||| ||| || | || ||||| |||||||| || || || Sbjct 17562 CAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCC 17621 Query 114619 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 114653 ||||| || ||||| | || ||||| | ||||| Sbjct 17622 GGTCTCTGTCTGGGATTCGATGATAGCGTACCAGA 17656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596875851524560