Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq30096 98.7 1e-15 seq29751 86.0 6e-12 >seq30096 Length=29002 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| ||| || || | || || ||||||||||| ||| ||||| || ||||||||| Sbjct 17518 TACTCCACTATTTCCGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 17577 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 153761 || || || ||||| | ||||||| | |||||||||||| ||||||||| || | | Sbjct 17578 CTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCTGTCTGGGAT 17637 Query 153762 TCGACGATA 153770 |||| |||| Sbjct 17638 TCGATGATA 17646 >seq29751 Length=8246 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||||||||| || ||| ||| || || || || || || | | Sbjct 31 GATTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 90 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| || || || || || ||||| ||||| ||| || || | Sbjct 91 AAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACG 150 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||| | || | || || |||||||| || || Sbjct 151 TTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 210 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 211 ACAAAGATCTGCATG 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495865501739040