Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq21415 123 8e-25 seq35613 118 3e-23 seq43053 82.4 2e-12 >seq21415 Length=126186 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 44614 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 44673 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 44674 CCCGGGCTTCAGC 44686 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 56887 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 56828 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 56827 CCCGGGCTTCAGC 56815 >seq35613 Length=46580 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 44905 GGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 44846 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 44845 CCCGGGCTTCAGC 44833 >seq43053 Length=1647 Score = 82.4 bits (90), Expect = 2e-12 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | |||||||||| ||| ||||| | ||||||||| ||| |||||||||| |||||| Sbjct 1249 GGCGGGAGTAGCTCAGCTGGCAGAGCGTGAGACTGAAGGTCTCAAGGTCCCTGCTTCAAC 1308 Query 2828 CCCGGGCTTCAGC 2840 ||||| | ||||| Sbjct 1309 CCCGGCCATCAGC 1321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15838508400390