Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq53428 91.5 2e-13 seq54462 86.0 9e-12 >seq53428 Length=17668 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| ||||||| || |||| || || |||||||| | |||||||| Sbjct 707 TGGGGCAGGAGGTGTTTGGGCTGCTGCCGGGGCTCTGCGTGTACGCTACGCTCTGGCTGC 766 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | ||||||||| | || |||||| | |||||| ||||| || ||||||||||| | Sbjct 767 GTGAGCACAACCGCGTCTGCGACATATTGAAACGGGAGCATCCCACCTGGAACGACGAGC 826 Query 214212 AGCTGTTCCAGATCACTCGTTTAATCATTA 214241 |||| ||||||| ||||| | ||| ||| Sbjct 827 AGCTCTTCCAGACGGCTCGTCTCATCCTTA 856 >seq54462 Length=24836 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || || || ||| |||| || | || ||||||||||| || Sbjct 21718 GAGGTGTTTGGTTTGGTCCCAGGCTTGATGATGTATGCTACAATATGGCTGAGAGAACAT 21659 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 || |||| || ||| | |||||||| ||||| || || ||| | || || ||||||||| Sbjct 21658 AATCGGGTCTGTGACATCCTGAAACAGGAGCATCCAGAGTGGGATGATGAGCAGCTGTTC 21599 Query 214220 CA 214221 || Sbjct 21598 CA 21597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722762290111680