Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq44843 138 1e-27 >seq44843 Length=947 Score = 138 bits (152), Expect = 1e-27 Identities = 115/140 (82%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGA--TCCACCACA 13728 || ||||||| ||| |||| ||||| |||||||||||||| || || | |||| ||| Sbjct 722 CCGCTGAGCCAGGAGGAGGCAGAGTTCCCCATCGCCTACTCCATGGTCACATCCATGACA 663 Query 13729 AGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCG 13788 | ||||||||||||||||| || |||||| || |||||| ||| |||||| ||||||||| Sbjct 662 AAATCGAGATGTTCGAGCGGCTTCTGAGGTCCCTCTACGTCCCCCAGAACATCTACTGCG 603 Query 13789 TCCACGTGGACTCCAAGTCC 13808 |||| || ||| ||||||| Sbjct 602 TCCATGTTGACCGCAAGTCC 583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658212356856320