Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1803 91.5 1e-13 >seq1803 Length=26599 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 34275 TGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCT 34334 |||| ||||| ||| | || || |||| || ||||| | ||| |||||||| | Sbjct 1784 TGTGTTTCGTA--GGGTTCTACAAATGCCAAAGAACTCTCTGCAAAGGGTGTGAAGATTT 1841 Query 34335 GGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGG 34394 |||| ||| | || || || || || ||||| |||| ||| ||| | | ||||||| Sbjct 1842 GGGATGCTAATGGATCACGTGAGTTCCTGGATAAGCAGGGTTTCAGCACCAGAGAGGAGG 1901 Query 34395 GCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | || ||||| || || || || ||||||||||| |||||||| || || || Sbjct 1902 GAGATTTGGGACCAGTTTATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATA 1953 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| || || || || ||||| || |||||||| Sbjct 1953 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCTCCCTCCTCT 1894 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | ||| ||| |||| ||||| || || || || || | ||| ||||| |||||| Sbjct 1893 CTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTC 1834 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACA 7070 || ||| | ||||| || |||| || || | ||| ||||| |||| Sbjct 1833 ACACCCTTTGCAGAGAGTTCTTTGGCATTTGTAGAACCC--TACGAAACACA 1784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447903890939040