Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq8428 104 2e-17 >seq8428 Length=24495 Score = 104 bits (114), Expect = 2e-17 Identities = 112/148 (76%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | || || || ||| Sbjct 22539 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 22598 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || |||||||| ||||||| |||| || |||||||| ||||||||||| Sbjct 22599 CTGGTGCAGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 22654 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | ||||||||| Sbjct 22655 CTTCACACCCTTTGCAGAGAGCTCTTTG 22682 Score = 86.0 bits (94), Expect = 4e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 19194 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 19253 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA-TCACACACATA 97235 ||||||||||| | || || ||||| | || || || | | ||| ||| | ||||| Sbjct 19254 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTCAGA-ACATA 19312 Query 97236 AAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || |||| ||||| Sbjct 19313 GAACTGGCAAAGGGCATGGCATGGAGGCAGAGCCAT 19348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346501737872450