Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq54874 104 9e-17 seq895 104 9e-17 seq36297 91.5 6e-13 >seq54874 Length=50929 Score = 104 bits (114), Expect = 9e-17 Identities = 199/291 (68%), Gaps = 7/291 (2%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || || || || || ||||| |||||||| | || || || || || ||||||| Sbjct 906 ATGCTGTCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATG 965 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || |||| | ||||| | || ||||| || || || |||||||||||| Sbjct 966 CTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAACGAGCCCACAGCAGCTGCTA 1025 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATTTTAGTATT 451494 |||| ||||| || ||| || ||| | | | | ||| || ||| | | |||| Sbjct 1026 TAGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCTGGAGAGAAGAATGTACTCATATT 1083 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| || || || || ||| |||| || | ||| | ||||| ||||| | ||||| Sbjct 1084 TGACTTGGGAGGGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATTTTTGA 1143 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||| | || |||||| || ||||| || || || || |||| || Sbjct 1144 GGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAA 1194 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 451981 TAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCT 452040 ||||||| | || || ||||| |||||||| ||||||||||| || ||||||||||| || Sbjct 1570 TAAGAGCATCAACCCCGATGAGGCTGTTGCTTATGGTGCTGCTGTGCAAGCAGCTATCCT 1629 Query 452041 AACAGG-TTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTAT 452099 | || || || ||| || | ||| | ||| | | ||||| || ||| | | Sbjct 1630 CATGGGAGACAAAT-CTGAGAACGTGCAGGATCTGCTGCTCTTGGATGTCACCCCTTTGT 1688 Query 452100 CTCTTGGAGTTGAAACAGCTGGTGGAATGATGAC 452133 |||| || |||| |||||||| ||| ||||||| Sbjct 1689 CTCTGGGCATTGAGACAGCTGGCGGAGTGATGAC 1722 >seq895 Length=11182 Score = 104 bits (114), Expect = 9e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| ||| | ||||| || || ||||||||||| | || || || || || Sbjct 1754 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 1813 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| |||||| || | || || || |||||||| ||||| || ||||| Sbjct 1814 AAAGATGCTGGAACTATTGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCAACAGCT 1873 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 1874 GCTGCCATAGCCTATGGCCT 1893 >seq36297 Length=6854 Score = 91.5 bits (100), Expect = 6e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| || ||||||| || || || ||||||||||| || || || || || Sbjct 996 GTTACTCATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCTACA 1055 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| || ||||||||| || ||||| | ||||||||||||| || Sbjct 1056 AAAGATGCTGGTACTATTGCTGGGTTGAATGTGATGAGAATTATTAATGAGCC 1108 Score = 84.2 bits (92), Expect = 9e-11 Identities = 83/107 (78%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 590 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 649 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| | ||||| || || || ||||| ||||| ||||| Sbjct 650 GAAGAAATTTCTGCGATGGTCCTCACAAAGATGAAGGAAACTGCAGA 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974027811722780