Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq895 118 8e-21 >seq895 Length=11182 Score = 118 bits (130), Expect = 8e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| |||||||||||||| |||||| |||| | || || ||||| ||||||| Sbjct 947 CAAAAACTGTATTGGTTGGATTCATTGCAACTTGGTTCTTTGCAGCATCGCCAATCAACC 888 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 || || ||||| || | ||| || ||| || ||||| ||||| || ||||| |||| Sbjct 887 TCTCCGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTGCGGTTACCCTGGTCATTGGCAA 828 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | ||||| || || |||| ||| ||||||| ||||| | | || || || | ||||| Sbjct 827 TGATTTCCACCTTCCCATGTTGGAATACACCAACACAGGAATAGGTGGTGCCAAGATCAA 768 Query 518703 TACCAATAGC 518712 | || | ||| Sbjct 767 TTCCGACAGC 758 Score = 113 bits (124), Expect = 3e-19 Identities = 364/555 (66%), Gaps = 20/555 (4%) Strand=Plus/Minus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| || ||||||||||||||||| | | | || || | ||| |||||||| Sbjct 2558 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 2499 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 |||| || |||| ||| | ||| || ||||||| || || ||||| | ||||| Sbjct 2498 AAATCCTGCAGCAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACAAT 2440 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAA 517787 ||||| | ||| ||||| || ||||| | ||| | | |||||||| || | ||| Sbjct 2439 GTCATGGATCTGAGATTTGTCGAGTTTAGCATCTCGCAGGGCCTTTTCAACAGGATCCAA 2380 Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGA 517844 | | | | |||| ||| | || ||||| || |||||| |||| || ||| Sbjct 2379 GGTAC-CACGGAACAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTG- 2322 Query 517845 CATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 517903 || || ||||| || || | | |||||| | |||||| | | || || |||| Sbjct 2321 ---TAGAAGTCAATACCCTCATAGAGAGAATCTATTTCAATACTGGCCTGCGTGCTAGAA 2265 Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGC 517959 || || | ||| || ||||| || ||||| || | || | || | | ||| | | Sbjct 2264 GACAGAGTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTC 2205 Query 517960 TGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAG 518019 | | |||| ||| | || | || | |||||| || | | | | || | Sbjct 2204 TCACTGAT----GTCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCAT 2149 Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||||| ||||| ||||| || ||||| | || | |||| || | | || | || Sbjct 2148 GCGATTGTCAAAGTCTTCTCCACCCAAGTGGGTGTCACCTGCAGTGGACTTCACCTCAAA 2089 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | |||||||||| || || || | |||||| ||| ||||| || | ||||| || Sbjct 2088 TATGCCATCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGAT 2029 Query 518140 AAGTACATTCATTTC 518154 ||| |||||| |||| Sbjct 2028 AAGAACATTCCTTTC 2014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3777508308310210