Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3258 100 4e-16 >seq3258 Length=22478 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | ||||| | | |||||||| |||||||| || || || ||||| ||||||||| Sbjct 10271 TGGTACGCTATCATTGAATCTCAAACAGAGACTGGCACCCCGTACATGCTGTACAAAGAC 10330 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 | || |||| ||||| ||||| |||| ||||| ||||| | ||| || ||| Sbjct 10331 TCTTGCAACCGGAAGAGCAATCAGCAGAACTTGGGAACCATCAAATGCAGCAATCTGTGT 10390 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 |||||||| |||| ||||| |||||||||| Sbjct 10391 ACAGAAATAGTGGAGTTTACCAGCAAAGATGAG 10423 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 112896 AACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 112955 ||||| ||| | | | || |||||||| || || || || || |||||||| ||||| Sbjct 14212 AACAGCCTTCTCCTTTCTCCCATGCCAACTGCTTCTACTGCTCAGATCTTGGGCAATAAC 14271 Query 112956 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 113015 |||| | | ||||||||||| | ||||||||| | ||| |||| ||||||||||| Sbjct 14272 GAATCCATCGAACCCTACACCAGTAACATCTATACACGCAGAGTCCTCTCGGGAGAGTTT 14331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620224196485200