Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq50962 96.9 4e-15 seq9097 96.9 4e-15 seq36503 95.1 1e-14 seq3258 87.8 2e-12 seq30157 82.4 9e-11 >seq50962 Length=9112 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 9104 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 9045 Query 136777 GGGAACAGCTTTT 136789 || ||||| || Sbjct 9044 CGGGCCAGCTGTT 9032 >seq9097 Length=73131 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 72768 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 72827 Query 136777 GGGAACAGCTTTT 136789 || ||||| || Sbjct 72828 CGGGCCAGCTGTT 72840 >seq36503 Length=23055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 680 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 621 Query 136777 GGGAACAGCT 136786 || ||||| Sbjct 620 CGGGCCAGCT 611 >seq3258 Length=22478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812 ||||||||| | ||||||||||||| | || || ||||| | ||| || ||||| ||| Sbjct 14303 TAGATGTTACTGGTGTAGGGTTCGATGGATTCGTTATTGCCCAAGATCTGAGCAGTAGAA 14244 Query 109813 GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || || |||||||||| | |||||| ||||||| || ||| Sbjct 14243 GCAGTTGGCATGGGAGAAAGGAGAAGGCTGTTTCTGACACC 14203 >seq30157 Length=13407 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 ||| ||||| || | ||| || |||||||| ||||| || || || |||||||||||||| Sbjct 8417 ATATTCACCTACTCGCTTCTCAAAGAAATTGGTCTTGCCTTCCAGAGAGATGTTTTCCAT 8476 Query 119267 AAAGTCAAAAGGATT 119281 |||||||||||||| Sbjct 8477 GAAGTCAAAAGGATT 8491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588484315473000