Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq39782 206 4e-47 seq44577 205 1e-46 seq48313 201 2e-45 seq17961 201 2e-45 seq45470 188 1e-41 seq23379 170 3e-36 seq16332 170 3e-36 >seq39782 Length=8611 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||||||||| || ||||||||| ||||||| || || ||| Sbjct 7865 TGTACTTGGTGACAGCCTTGGTACCCTCAGACACGGCGTGCTTGGCCAGCTCACCTGGCA 7924 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||| ||||||||||| || | ||| ||| ||||||||| | Sbjct 7925 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAAGTGATGGTGGAGCGCTTGTTGTAGT 7984 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||| |||||||| ||||||| Sbjct 7985 GCGCCAGGCGAGAAGCCTCGCCGGCGATGCGCTCGAAGATGTCATTGACAAAGGAGTTCA 8044 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 8045 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 8104 Query 1485710 AAAC 1485713 | || Sbjct 8105 ACAC 8108 >seq44577 Length=27313 Score = 205 bits (226), Expect = 1e-46 Identities = 199/256 (78%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||||||||| |||||| ||||||| || || | | Sbjct 14949 TGTACTTGGTGACGGCCTTGGTGCCCTCTGAGACAGCGTGCTTGGCCAGCTCTCCCGGGA 15008 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||| ||||| |||| | ||| ||| ||||||||| Sbjct 15009 GCAGCAGGCGCACGGCCGTCTGAATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 15068 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||| || ||||||| |||| ||||||||||| || ||||||| Sbjct 15069 GGGCCAGGCGGGAGGCTTCTCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 15128 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| |||||||| |||||||||| Sbjct 15129 TGATGCCCATAGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 15188 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 15189 AGACATAGATGGAGTA 15204 >seq48313 Length=1268 Score = 201 bits (222), Expect = 2e-45 Identities = 198/256 (77%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || | ||||||| ||||||| || || ||| Sbjct 719 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACAGGGCGTGCTTGGCCAGCTCCCCCGGCA 660 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || ||||||||||| || | ||| ||| ||||||||| | Sbjct 659 GCAGGAGCCGCACAGCCGTCTGGATCTCCCGCGAAGTGATGGTGGAGCGCTTGTTGTAGT 600 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| || ||||||| Sbjct 599 GCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 540 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 539 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 480 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 479 ACACATAGATAGAGTA 464 >seq17961 Length=2001 Score = 201 bits (222), Expect = 2e-45 Identities = 198/256 (77%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || | ||| Sbjct 1251 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACGCGGCA 1310 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || ||||||||||| || | | ||| ||| ||||||||| | Sbjct 1311 GCAGGAGCCGCACAGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 1370 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||| ||||| || ||||||| Sbjct 1371 GCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCATTGACGAAAGAGTTCA 1430 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 1431 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 1490 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 1491 ACACGTAGATCGAGTA 1506 >seq45470 Length=4528 Score = 188 bits (208), Expect = 1e-41 Identities = 188/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 3893 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCCGGCA 3834 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || ||||||||||| || | ||| ||| ||||||||| | Sbjct 3833 GCAGGAGCCGCACAGCCGTCTGGATCTCCCGCGAAGTGATGGTGGAGCGCTTGTTGTAGT 3774 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| || |||||||| || ||||||| Sbjct 3773 GCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGATATCGTTGACGAAGGAGTTCA 3714 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| |||||||| ||||| |||| Sbjct 3713 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACTTTGT 3654 Query 1485710 AAAC 1485713 | || Sbjct 3653 ACAC 3650 >seq23379 Length=7530 Score = 170 bits (188), Expect = 3e-36 Identities = 184/244 (75%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||| ||| ||||||| || || ||| Sbjct 1495 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCATGCTTGGCCAGCTCACCCGGCA 1554 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||| ||||||||||| || | ||| ||| ||||||||| | Sbjct 1555 GCAGAAGCCGCACGGCTGTCTGGATCTCCCGCGAAGTGATGGTGGAGCGCTTGTTGTAGT 1614 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||| |||| ||||| ||||| || ||||||| Sbjct 1615 GCGCCAGGCGAGAGGCCTCGCCAGCAATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 1674 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| || |||||||||||||| ||||| |||| Sbjct 1675 TGATGCCCATAGCCTTGGACGAGATGCCTGTATCAGGGTGCACCTGCTTCAGCACTTTGT 1734 Query 1485710 AAAC 1485713 | || Sbjct 1735 ACAC 1738 >seq16332 Length=1818 Score = 170 bits (188), Expect = 3e-36 Identities = 190/254 (75%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||| ||||| |||||||||||||| |||||||||||| ||||||| ||||| | | Sbjct 1473 TACTTAGTGACAGCCTTGGTACCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCAGGTAAC 1414 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || |||||||||||||| ||||| || | | ||| ||| |||||||| | | Sbjct 1413 AGGAGCCGCACGGCGGTCTGAATCTCTCGCGAGGTGATGGTGGAACGCTTGTTGTAGTGG 1354 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || | ||| ||||| ||||||| |||| || |||||||| || ||||||||| Sbjct 1353 GCTAAGCGCGACGCCTCACCTGCGATGCGCTCGAAAATATCGTTGACGAAAGAGTTCATG 1294 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||| | ||| |||||| || |||||||||||||||||| | ||||||||| Sbjct 1293 ATGCCCATAGCCTTGGAGGAGATACCAGTGTCGGGGTGCACCTGCTTCAACACCTTGTAG 1234 Query 1485712 ACAAAGGACGAGTA 1485725 ||| || ||||| Sbjct 1233 ACATAGATGGAGTA 1220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7909142174943615