Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3258 109 5e-19 >seq3258 Length=22478 Score = 109 bits (120), Expect = 5e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 147506 ACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGC 147565 ||| ||| ||||| | ||||| ||||||||||| ||| |||||| || |||||||||| Sbjct 10406 ACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTTCCCAAGTTCTGCTGATTGC 10347 Query 147566 TTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTT 147625 | ||||| ||||| | ||||||| | ||||||||||| ||| ||||| ||| | || Sbjct 10346 TCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGGGTGCCAGTCTCTGTTTGAGATT 10287 Query 147626 CAACGATA 147633 ||| |||| Sbjct 10286 CAATGATA 10279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476213319012600