Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08]
66,785 sequences; 1,152,958,507 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq56936 95.1 1e-14
>seq56936
Length=3908
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| || | |||| | ||||| ||||| || ||
Sbjct 929 GTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGACCATCTTCCAGCTGCTTGCCT 870
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || || | ||| |||||||| || | || || || || ||||||| ||
Sbjct 869 GCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 810
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| ||| |||||| || || || || | ||||| ||||| ||
Sbjct 809 ACGTTCTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 750
Query 27231 TTCACAAAGATTTGCAT 27247
||||||||||| |||||
Sbjct 749 TTCACAAAGATCTGCAT 733
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| || | |||| ||||||| ||||| || ||
Sbjct 1385 GTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTCCAGCTGCTTGCCA 1326
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || | ||| ||||| || || | || || || || ||||||| ||
Sbjct 1325 GCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 1266
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| |||| | ||||| ||| ||||| || || || || | ||||| |||| ||
Sbjct 1265 ACATTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTC 1206
Query 27231 TTCACAAAGATTTGCAT 27247
||||||||||| |||||
Sbjct 1205 TTCACAAAGATCTGCAT 1189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424588527964920
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |