Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq7985 111 2e-19 >seq7985 Length=643 Score = 111 bits (122), Expect = 2e-19 Identities = 195/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 13753 TGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGCG 13812 || || || ||||| |||| |||||| |||||||||||||||| ||| ||||||| | Sbjct 643 TGCGGTCCCTCTACACCCCCCAGAACGTCTACTGCGTCCACGTTGACGGCAAGTCCCCAG 584 Query 13813 ACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCC 13872 || ||| | || ||| ||||||||| |||||||| || || |||| Sbjct 583 CCGCCTTCCAGCAGGCCGTGCAGGCCATCGCAGCCTGCTTCCCCAATGTCTTTGTGGCTA 524 Query 13873 ACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCA 13932 ||| ||| | | ||||| || | ||||||| || |||| || ||||||| ||| | Sbjct 523 GCCGCCTGGAAAAGGTGGTCTATGCCTCCTGGTCCCGGCTGCAAGCTGACCTCAACTGTA 464 Query 13933 TGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGG 13992 || ||||||| ||| || ||| | ||| | |||||| ||||| | | Sbjct 463 TGCGGGACCTGTTGCAGAGCCCTGTGCCATGGCGCTACGTCCTCAACACCTGCGGCACCG 404 Query 13993 ACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 | ||||| |||||||||| |||||||| || || |||||| Sbjct 403 ATTTCCCCATCAAGACCAATGCCGAGATCGTCCGCGCCCTGAAG 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658189276281600