Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq8428 105 5e-18 >seq8428 Length=24495 Score = 105 bits (116), Expect = 5e-18 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| |||||||| || |||||||| ||||| || || || ||||||| || Sbjct 22529 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 22588 Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||||| || ||| ||| ||| ||| ||| |||| || || | || || || || | Sbjct 22589 CCCCTCCTCTCTGGTGCA-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 22647 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| ||||| || ||||| | ||||||||||||| ||||| || || ||| | || | Sbjct 22648 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CTG-CAAAAC 22705 Query 27668 ACAG 27671 |||| Sbjct 22706 ACAG 22709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369206442501335