Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq13461 118 8e-22
seq42754 95.1 9e-15
>seq13461
Length=29779
Score = 118 bits (130), Expect = 8e-22
Identities = 92/110 (84%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| ||||||| || | |||||||||| |||||||||| || |||||||||||
Sbjct 27970 CTTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 28029
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || || |||||||| |||| | |||||||||| |||
Sbjct 28030 AATGGAGAACCAGGTTTTCTTACCCATTATCAGTGCATTCTGTTTACCTG 28079
>seq42754
Length=2386
Score = 95.1 bits (104), Expect = 9e-15
Identities = 133/183 (73%), Gaps = 3/183 (2%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || ||||| | ||| || |
Sbjct 389 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCT 448
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| ||||| | ||||| | || | |||||||| ||||||||||
Sbjct 449 CTTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAA 508
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACA-AC 102211
| | ||| || ||| || ||||||||| | ||||| || || | ||| |||| ||
Sbjct 509 TCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAGAC 566
Query 102212 AGT 102214
|||
Sbjct 567 AGT 569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360915758956439
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |