Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq42754 104 2e-17
seq46700 82.4 5e-11
>seq42754
Length=2386
Score = 104 bits (114), Expect = 2e-17
Identities = 112/148 (76%), Gaps = 8/148 (5%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||||||||| |||||||| ||||| |||||||| ||||| | || || ||||||
Sbjct 394 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCTTCT 453
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517
|| | |||||| ||||||| |||| || |||||||| |||||||||||
Sbjct 454 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 509
Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545
| |||||| ||| | |||||||||
Sbjct 510 CTTCACACCCTTTGCAGAGAGCTCTTTG 537
>seq46700
Length=11970
Score = 82.4 bits (90), Expect = 5e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| | || | || |||||||||||||| || |||||||| ||
Sbjct 8975 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTAGCAATATTGAAAGGCACTCCG 9034
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
|||||||| || | || || ||||| | || || || | | |||| |||||
Sbjct 9035 AGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 9094
Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271
||||| | | |||| || || ||||| |||||
Sbjct 9095 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 9129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346461992524730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |