Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq46700 122 7e-23 >seq46700 Length=11970 Score = 122 bits (134), Expect = 7e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||||||||| ||| || ||||| || || ||| || Sbjct 9142 AGATATTTCTCTGATGGCTTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAA 9083 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||||||||| || ||| | ||||| | || | || |||||||| || || ||||| Sbjct 9082 TGGTGAATTGTCTTGCCAACTCTATCAGAGGTCTGGAGACATGGGACTCGGAGTGCCTTT 9023 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||||||| || ||| | ||||| || || |||||||| ||||| |||| Sbjct 9022 CAATATTGCTAGCTATTCACTGCTCACATACATGATTGCCCATGTCACAG 8973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398813336324605