Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq35785 95.1 1e-14 >seq35785 Length=10255 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/124 (78%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 157106 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGATTGCTTTT 157164 |||||||| | ||||| |||||||||||| || ||| ||| | || |||||||| || Sbjct 9792 ACTATTTCTGTACACAGATTGCTGCATTTGATGG-TCCCCAAGTTCTGCTGATTGCTCTT 9734 Query 157165 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 157224 |||||||||| ||| ||||| | ||||||||||||||| || || | ||| || || Sbjct 9733 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCAGTCTCTGTCTGAGACTCAAT 9674 Query 157225 GATG 157228 |||| Sbjct 9673 GATG 9670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506531538498480