Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq40046 84.2 3e-11 >seq40046 Length=27629 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| || ||| | ||||| ||| | || |||||||||| || |||||||||||| Sbjct 17773 TAGGCTGCAAGCATGTGAAAGGCATTCTTTTGTATGGACCTCCAGGCTGCGGTAAAACAC 17832 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATG 164617 | ||||| || |||| |||| | | ||| | || || || | || |||| Sbjct 17833 TTATGGCGAGACAGATTG-GCAAGATGCTGAATGCCAGAGAACC--AAAGGTGGTCAATG 17889 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 |||| ||| | | || |||||||| || || || || || || | | ||| ||||| Sbjct 17890 GTCCAGAAATCCTCAATAAATATGTGGGCGAATCCGAGGCCAACATCCGCAAGCTGTTTG 17949 Query 164678 AGGAGGCTGAAGAAGAACAAA 164698 || || ||||||||||||| Sbjct 17950 CTGATGCAGAAGAAGAACAAA 17970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595304513852400