Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 178 2e-39
>seq66148
Length=2144
Score = 178 bits (196), Expect = 2e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | || || |||||||| || |||||||| || ||||| || || | |
Sbjct 693 AGGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 634
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| |||||||| || || || || || || || ||||||||||||
Sbjct 633 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCC 574
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| |||||||| || |||||||| | || ||||||| ||||
Sbjct 573 TTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACTTCCAGGGTG 514
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| |||||||| || || ||||||||
Sbjct 513 ATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 476
Score = 178 bits (196), Expect = 2e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | || || ||||| || || |||||||| || ||||| || || | |
Sbjct 921 AGGCGCAGCACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 862
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| |||||||| || || || || || || || ||||||||||||
Sbjct 861 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCC 802
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| |||||||| ||| |||||||| | || ||||||| ||||
Sbjct 801 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTG 742
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| |||||||| || || ||||||||
Sbjct 741 ATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 704
Score = 170 bits (188), Expect = 4e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | || || ||||| || || |||||||| || ||||| || || | |
Sbjct 465 AGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 406
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| |||||||| || || || || || || || ||||||||||||
Sbjct 405 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCC 346
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| |||||||| || |||||||| | || || |||||||||
Sbjct 345 TTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACCTCCAAGGTG 286
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||| || || || |||||||| || || |||||||||
Sbjct 285 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATT 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920744681387080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |