Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 93.3 3e-14
>seq66148
Length=2144
Score = 93.3 bits (102), Expect = 3e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || ||||| |||||||| |||||||| ||| |||||||| |||||||| || |
Sbjct 931 ACCACCCCTCAGGCGCAGCACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 872
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| ||| | || |||| ||||||||||| || ||||| | |||||||||| ||
Sbjct 871 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGG 812
Query 34020 CACGCTCTCTTTGTCC 34035
| || || ||||||
Sbjct 811 AATGCCTTCCTTGTCC 796
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || ||||| |||||||| ||||| || ||| ||||||||| |||||||| || | |
Sbjct 702 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 643
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| ||| | || |||| ||||||||||| || ||||| | |||||||||| ||
Sbjct 642 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGA 583
Query 34021 ACGCTCTCTTTGTCC 34035
| || || ||||||
Sbjct 582 ATGCCTTCCTTGTCC 568
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || ||||| |||||||| ||||| || ||| |||||||| |||||||| || | |
Sbjct 474 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 415
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| ||| | || |||| ||||||||||| || ||||| | |||||||||| ||
Sbjct 414 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGA 355
Query 34021 ACGCTCTCTTTGTCC 34035
| || || ||||||
Sbjct 354 ATGCCTTCCTTGTCC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396693706343578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |