Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq5077 104 9e-17
seq29587 84.2 9e-11
>seq5077
Length=15507
Score = 104 bits (114), Expect = 9e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| ||| | ||||| || || ||||||||||| | || || || || ||
Sbjct 1176 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 1235
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| |||||| || | ||||| || |||||||| ||||| || |||||
Sbjct 1236 AAAGATGCTGGAACTATTGCAGGGCTCAATGTGCTGCGAATTATCAATGAGCCAACAGCT 1295
Query 451433 GCTGCTCTAGCATATGGACT 451452
||||| | || ||||| ||
Sbjct 1296 GCTGCAATCGCTTATGGGCT 1315
>seq29587
Length=6781
Score = 84.2 bits (92), Expect = 9e-11
Identities = 83/107 (78%), Gaps = 3/107 (3%)
Strand=Plus/Plus
Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246
|||| ||||| |||||||||| || | ||||| | || ||||| |||||||||
Sbjct 495 AAAGCCAAGCCTCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 554
Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293
||||||||||| ||||||| || || || ||||| ||||| |||||
Sbjct 555 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACGGCAGA 601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1973789759882412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |