Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq42754 120 2e-22
seq13461 87.8 1e-12
>seq42754
Length=2386
Score = 120 bits (132), Expect = 2e-22
Identities = 140/184 (76%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| |||||||| || |||||||||||||| || || || ||||||| ||
Sbjct 384 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 443
Query 30210 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
|||||||| || ||||| ||| ||| ||| |||| || || | || || || || |
Sbjct 444 CCCCTCTTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 502
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328
|||| ||||| || ||||| | ||||||||||||| ||||| || || || || || |
Sbjct 503 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 560
Query 30329 ACAG 30332
||||
Sbjct 561 ACAG 564
>seq13461
Length=29779
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| |||||||||||||| |||| || || |||||| | | ||| | |||||| || ||
Sbjct 27971 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 28030
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||||||||| || || |||||||||||| | ||||| || |||
Sbjct 28031 ATGGAGAACCAGGTTTTCTTACCCATTATCAGTGCATTCTGTTTACCT 28078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408238176722897
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |