Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 100 2e-16
>seq66148
Length=2144
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||||||||| ||||| || || || ||||| |||| | || | |||| |||| ||
Sbjct 907 ATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTG 848
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || |||| | ||| ||||| || ||||||||||| || || || || ||
Sbjct 847 CTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 788
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | |||||| | || ||||| || |||| || ||||| ||
Sbjct 787 GGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCCGT 728
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| || || ||||| |||||||||
Sbjct 727 CAGGGTCTTCACAAAGATCTGCATG 703
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| || || || || || ||||| |||| | || | |||| |||| ||
Sbjct 679 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTG 620
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || |||| | ||| ||||| || ||||||||||| || || || || ||
Sbjct 619 CTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 560
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| |||| | |||||| | || ||||| || |||| || ||||| ||
Sbjct 559 GGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCCGT 500
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| || || ||||| |||||||||
Sbjct 499 CAGGGTCTTCACAAAGATCTGCATG 475
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| ||||| || || || ||||| |||| | || | |||| |||| ||
Sbjct 451 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTG 392
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || |||| | ||| ||||| || ||||||||||| || || || || ||
Sbjct 391 CTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 332
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| |||| | |||||| | || || || | |||| || ||||| ||
Sbjct 331 GGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCTGT 272
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||||||
Sbjct 271 CAGGGTCTTCACAAAGATCTGCAT 248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395910434329473
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |