Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq62365 360 3e-94
seq5077 215 7e-51
seq66148 167 3e-36
seq29587 118 1e-21
seq38623 98.7 1e-15
>seq62365
Length=2392
Score = 360 bits (398), Expect = 3e-94
Identities = 1032/1576 (65%), Gaps = 21/1576 (1%)
Strand=Plus/Minus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|| || || ||||| || || || || ||||| || || ||||| | || |||
Sbjct 2320 GCAATCGGCATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTTCCAGCATGGCAAA 2261
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
|| ||||| ||| | || ||||| || ||||| || || || || || ||||| ||
Sbjct 2260 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACACCCAGCTATGTGGCCTTCACC 2201
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|||| || || ||| |||| || || || || || ||| ||||||||||||| |||
Sbjct 2200 GATACAGAGCGCCTCATTGGTGACGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 2141
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
|| ||||||| || |||||||| || || ||||||| | || | || || |
Sbjct 2140 ACCATCTTTGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGGCT 2081
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598
|| || ||| ||||| | | || || || || || ||||| | | | |
Sbjct 2080 GACATGAAGCACTGGCCCTTCCGTGTGGTGAA---TGAGGGTGGCAAGCCCAAGGTGCAA 2024
Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATGGTGTT 195657
|| || | | ||||||| ||| | || |||| || || || || ||||| |
Sbjct 2023 GTGGAGTACAAGGGTGAGATGAAG-ACCTTCTTCCCAGAGGAGATCAGCTCCATGGTCCT 1965
Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717
| ||||||||||||| ||| || | | |||| | ||| | |||| || |
Sbjct 1964 TACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCGCAAAGTGCAGAATGCTGTCAT 1905
Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777
|| || ||||| ||||||| ||| || || || ||||| || || || |||| | ||
Sbjct 1904 CACAGTGCCTGCCTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 1845
Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836
| || || || ||| | | |||||||| || || || || ||||| || || ||||
Sbjct 1844 CACTGGCCTTAA-TGTGATGCGTATTATCAACGAGCCCACGGCAGCTGCTATAGCCTATG 1786
Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890
| |||||||||| | || | ||| |||||||| | |||||||| | || |
Sbjct 1785 GCTTGGACAAGAAAGGTACCCGGGCTGGAGAGAAAAATGTGCTCATCTTTGACTTGGGAG 1726
Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950
| ||||| |||||||| || | || | ||||| | ||| || || || || ||| | |
Sbjct 1725 GGGGTACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCCA 1666
Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010
| |||||||| || ||||| ||||| || || || || || | | |||||
Sbjct 1665 CAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTG 1606
Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070
|| || ||| || ||| | ||| || ||| |||| || | || | | |
Sbjct 1605 TGGAAGAATTCAAGCGTAAGCACAAGCGCGACATTGCTGGCAACAAGCGAGCAGTGAGGC 1546
Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130
| || | || || ||||| | || || || |||||| ||| | | ||| | |
Sbjct 1545 GACTGCGTACGGCTTGTGAGAGGGCGAAGCGCACTCTCAGCTCTTCCACACAAGCTAGCA 1486
Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190
||||||| ||||| | | || || ||||||||||| || | ||||| ||||| || |
Sbjct 1485 TTGAGATCGATTCCCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGCT 1426
Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250
| || ||| | || ||||| | || | | |||| || || || | | || |
Sbjct 1425 TCGAGGAGCTCAATGCTGATCTCTTCCGTGGCACTCTGGAGCCGGTGGAGAAGGCTCTGC 1366
Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310
|||| || ||| | |||||| || | | || ||||| || ||||| || || ||||
Sbjct 1365 GTGATGCCAAGCTAGATAAGGGCCAGATCCAGGAGATTGTGCTGGTGGGTGGCTCTACCC 1306
Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370
|||| || ||||| ||| || |||| |||||||||| ||||| | ||||| |
Sbjct 1305 GTATCCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAACAAGA 1246
Query 196371 CGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAG 196430
|||||||| ||||| || |||||||||||||| || || || || ||||| ||||
Sbjct 1245 GCATCAACCCCGATGAGGCCGTTGCTTATGGTGCTGCTGTGCAAGCAGCTAT--CCTCAT 1188
Query 196431 GTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487
| | ||||| | | || || || ||||| ||||| | ||||| | || | ||||
Sbjct 1187 G-GGAGACAAGTCTGAGAATGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTGTCCC 1129
Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547
|||| | || ||||| ||||| || ||||| | || | | ||||| || ||||
Sbjct 1128 TGGGCATCGAGACAGCTGGTGGAGTGATGACCGCTCTCATCAAGCGCAACACCACCATTC 1069
Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCATATT 196606
| || || | || ||| | || || || || || || | || | || | |
Sbjct 1068 CCACCAAACAAACTCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GCGTCCTGGTG 1010
Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666
|| || || || || || | || | ||||| ||| | | || || | || ||
Sbjct 1009 CAGGTGTACGAGGGCGAGAGGGCCATGACGAAGGACAACAACTTGCTGGGCAAGTTTGAC 950
Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726
| ||||| || || | |||||| | || || || ||||| | || || || ||
Sbjct 949 CTAACGGGCATCCCCCCAGCACCCCGTGGAGTCCCCCAGATCGAGGTCACTTTTGACATC 890
Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786
|| || ||||| || || || |||| |||| ||||||| | || || | |||
Sbjct 889 GATGCCAATGGTATCCTGAATGTCAGTGCTGTGGACAAGAGCACGGGTAAGGAGAACAAG 830
Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846
|| || ||||| |||||||| || ||| ||||| || ||||| |||||||| |||
Sbjct 829 ATCACCATCACCAACGACAAGGGTCGCCTTAGCAAGGATGACATTGACCGTATGGTGCAA 770
Query 196847 GATGCGGAAAAGTACA 196862
|| || || || ||||
Sbjct 769 GAAGCAGAGAAATACA 754
>seq5077
Length=15507
Score = 215 bits (238), Expect = 7e-51
Identities = 371/539 (69%), Gaps = 0/539 (0%)
Strand=Plus/Plus
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
||||| | |||||||| || || ||||| || |||||||| ||| |||| | |||||||
Sbjct 1443 AATGTTCTTATCTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATTGAA 1502
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
| ||| || || || || || | ||||| ||||| ||||| | ||||| ||||| ||
Sbjct 1503 GATGGCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAAGACTTT 1562
Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045
|| || | || || || || || ||| || ||| |||||||||| ||
Sbjct 1563 GACAACCGCATGGTCAACCACTTCATTGCCGAATTCAAGCGCAAGCATAAGAAAGACATC 1622
Query 196046 TCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACT 196105
| || || || ||||||| || | |||||||| || ||||| || || |||
Sbjct 1623 AGCGAGAACAAGAGAGCAGTTCGTCGCCTCCGCACTGCATGCGAGCGTGCAAAGCGTACT 1682
Query 196106 CTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC 196165
|| || |||| | || | | |||| |||||||| | | ||| || |||||||||
Sbjct 1683 CTGTCGTCTAGCACGCAGGCCAGTATTGAAATTGATTCTCTCTATGAGGGTATTGACTTC 1742
Query 196166 TATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGT 196225
|| ||| | |||||| | || || ||||||||| | ||| |||| |||| |
Sbjct 1743 TACACATCCATTACCAGAGCTCGCTTTGAAGAGCTGAACGCTGACCTGTTCCGTGGCACC 1802
Query 196226 ATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAA 196285
|||| ||||| ||| | | || || || ||||| | || || || || | ||||
Sbjct 1803 CTGGATCCTGTGGAAAAGGCCCTCCGGGATGCAAAACTCGACAAATCGCAGATCCATGAC 1862
Query 196286 ATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTC 196345
||||| || || || || || || ||||| || |||||||| || ||||| |||
Sbjct 1863 ATTGTGCTGGTTGGTGGGTCTACTCGTATCCCAAAGATTCAGAAGCTGCTTCAGGATTTC 1922
Query 196346 TTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404
||||| ||||| | ||||| | ||||| || |||||||| || |||||||||||
Sbjct 1923 TTCAACGGCAAAGAGCTGAACAAGAGCATCAATCCTGATGAAGCTGTAGCTTATGGTGC 1981
Score = 125 bits (138), Expect = 9e-24
Identities = 115/143 (80%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767
|||| || ||||||||||| || || |||| ||| || || || ||||| ||||| || |
Sbjct 1183 ATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 1242
Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826
||| ||||||| || || || ||| || ||||||||||||| |||||||| ||||||
Sbjct 1243 CTGGAACTATTGCAGGGCTCAA-TGTGCTGCGAATTATCAATGAGCCAACAGCTGCTGCA 1301
Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849
|| |||||||| |||||||| ||
Sbjct 1302 ATCGCTTATGGGCTGGACAAAAA 1324
Score = 104 bits (114), Expect = 3e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 196610 GTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668
||||||||||||||||| | | || | ||||| ||| | | || || | || || |
Sbjct 2833 GTATATGAAGGAGAACG-TGCTATGACTAAGGACAACAACTTGCTGGGCAAGTTTGAGCT 2891
Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728
|||||| ||||| |||| ||||||||||| || |||||| | || ||| ||||| ||
Sbjct 2892 GACGGGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGA 2951
Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788
|| ||||| || || || || | |||| ||| ||| | ||||||| | |||||
Sbjct 2952 TGCCAATGGCATCCTGAATGTGTCTGCTGTGGATAAGAGTACTGGCAAGGAGAACAAGAT 3011
Query 196789 TGTGATTACCAATGACAAGGG 196809
||| || |||||||||||
Sbjct 3012 CACGATAACAAATGACAAGGG 3032
>seq66148
Length=2144
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| || || || || |||||||| || |||||| |
Sbjct 476 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 535
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || |||| |||||||| || || |||||||||||||| || ||||||
Sbjct 536 GACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 595
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || || || || || ||||| |||||||| || ||||| | || ||||||
Sbjct 596 CAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 655
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || |||||||| || || || ||||| || | || |||||||
Sbjct 656 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGG 702
Score = 163 bits (180), Expect = 4e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| || || || || |||||||| || |||||| |
Sbjct 704 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 763
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || |||| |||||||| || || |||||||||||||| || ||||||
Sbjct 764 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 823
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || || || || || ||||| |||||||| || ||||| | || ||||||
Sbjct 824 CAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 883
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || ||||| || || || || ||||| || | || ||||||||
Sbjct 884 ATCCAGAAGGAATCCACCCTTCATCTTGTGCTGCGCCTGAGGGGTGGT 931
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| || || || || |||||| | ||||||||| |
Sbjct 248 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 307
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || |||| |||||||| || || |||||||||||||| || ||||||
Sbjct 308 GACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 367
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || || || || || ||||| |||||||| || ||||| | || ||||||
Sbjct 368 CAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 427
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||||| || || || || ||||| || | || |||||||
Sbjct 428 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGG 474
>seq29587
Length=6781
Score = 118 bits (130), Expect = 1e-21
Identities = 170/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696
||||| || ||||| || |||||||||||| | || || || || |||| || | |||
Sbjct 2796 AAGGACAATCATCTTCTGGGAACTTTCGATCTCACTGGAATCCCTCCTGCCCCTCGTGGT 2855
Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756
|| || |||||| | ||| |||||| ||||| | || ||||| || |||||||||
Sbjct 2856 GTCCCCCAGATTGAAGTTACCTTCGAAATAGATGTGAACGGAATCCTCCGTGTCACAGCT 2915
Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816
|| ||||||| |||| || | ||||| |||||| ||||| || |||||
Sbjct 2916 GAAGACAAGGGCACTGGGAACAAAAACAAGATCACGATTACAAATGATCAGAACCGGCTG 2975
Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876
| ||||| ||||| | |||||| | ||||| || |||| |||||||||| ||
Sbjct 2976 ACACCAGAGGAGATTGAGAGGATGGTTAATGATGCTGAGAAGTTTGCGGAAGAAGACAAG 3035
>seq38623
Length=13507
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022
||||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct 13212 AGGCATTCCTCCTGATCAGCAGCGACTGATTTTTGCTGGTAAGCAGCTAGAAGATGGACG 13153
Query 172023 TACCCTCGCTGATTACAACGTTCAAAA 172049
|| || |||| ||||| |||||||
Sbjct 13152 CACGCTGTCTGACTACAATATTCAAAA 13126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657235876520080
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