Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq47714 224 2e-52
seq28048 223 5e-52
seq25714 223 5e-52
seq53582 219 7e-51
seq22761 219 7e-51
seq38302 183 5e-40
seq5782 86.0 1e-10
>seq47714
Length=5830
Score = 224 bits (248), Expect = 2e-52
Identities = 196/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 733 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 674
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 673 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 614
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 613 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 554
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 553 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 494
Query 1485710 AAAC 1485713
| ||
Sbjct 493 ACAC 490
>seq28048
Length=1890
Score = 223 bits (246), Expect = 5e-52
Identities = 203/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| ||||| |||
Sbjct 1157 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCAGGCA 1216
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 1217 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 1276
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 1277 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 1336
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 1337 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 1396
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 1397 ACACGTAGATCGAGTA 1412
>seq25714
Length=1417
Score = 223 bits (246), Expect = 5e-52
Identities = 203/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 504 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 445
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 444 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 385
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||| ||||| || |||||||
Sbjct 384 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 325
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 324 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 265
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 264 ACACGTAGATCGAGTA 249
>seq53582
Length=3920
Score = 219 bits (242), Expect = 7e-51
Identities = 195/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 729 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 788
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 789 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 848
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 849 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 908
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||||||||| ||||||||||
Sbjct 909 TGATGCCCATGGCCTTGGATGAGATGCCCGTGTCAGGGTGCACCTGCTTCAGCACCTTGT 968
Query 1485710 AAAC 1485713
| ||
Sbjct 969 ACAC 972
>seq22761
Length=1104
Score = 219 bits (242), Expect = 7e-51
Identities = 195/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||| ||| ||||||| |||||| |||
Sbjct 856 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCATGCTTGGCCAGCTCGCCGGGCA 797
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 796 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 737
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 736 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 677
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 676 TGATGCTCATGGCCTTGGATGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 617
Query 1485710 AAAC 1485713
| ||
Sbjct 616 ACAC 613
>seq38302
Length=22942
Score = 183 bits (202), Expect = 5e-40
Identities = 187/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||||| |||||| ||||||| || || | |
Sbjct 13584 TGTACTTGGTGACAGCCTTGGTGCCCTCCGAGACAGCGTGCTTGGCCAGCTCTCCCGGGA 13525
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || ||||||||| ||||| ||||| |||| | ||| ||| |||||||||
Sbjct 13524 GCAGCAAGCGCACGGCTGTCTGAATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 13465
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||||||| ||| || ||||||| || | ||||||||||| || |||||||
Sbjct 13464 GGGCCAGGCGGGAGGCTTCTCCAGCGATGCGCTCAAAGATGTCGTTGACGAAGGAGTTCA 13405
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||||||||| |||||||| ||||||||||
Sbjct 13404 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 13345
Query 1485710 AAAC 1485713
| ||
Sbjct 13344 AGAC 13341
>seq5782
Length=2271
Score = 86.0 bits (94), Expect = 1e-10
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| | ||||| ||||| |||
Sbjct 126 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTAGCCAGCTCGCCAGGCA 185
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTG 1485564
| || | |||||| ||||| | ||| ||| ||
Sbjct 186 GCAGGAGCCTCACGGCCGTCTGCACCTCACGGCTG 220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7908141828571971
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