Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 154 1e-32
>seq66148
Length=2144
Score = 154 bits (170), Expect = 1e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| ||||||||| ||||| ||||| ||
Sbjct 702 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 643
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| ||||| |||||||||||||| | ||||| || | ||
Sbjct 642 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGA 583
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || ||||| | | || | ||| ||| ||| ||
Sbjct 582 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACT 523
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct 522 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 475
Score = 154 bits (170), Expect = 1e-32
Identities = 175/233 (75%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|| || ||||||| | ||| || || |||| |||| |||||||| ||||| |||||
Sbjct 933 TTACCACCCCTCAGGCGCAGCACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCG 874
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| ||| ||||| |||| ||||| ||||| |||||||||||||| | ||||| || |
Sbjct 873 GACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGA 814
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCT 34925
|| | || |||||||| | || || ||||| || || || | ||| ||| ||
Sbjct 813 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCT 756
Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || || | ||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct 755 CAACTTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 703
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 474 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 415
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| ||||| |||||||||||||| | ||||| || | ||
Sbjct 414 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGA 355
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || ||||| | | || | ||| ||| ||| ||
Sbjct 354 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACC 295
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 294 TCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325390376830991
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |