Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq56774 105 9e-18
seq3012 86.0 8e-12
>seq56774
Length=13840
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 106 TTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 165
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 166 CCCCGACGGGGAG 178
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 107 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 166
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 167 CCCGACGGGGAGG 179
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 178 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 119
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 118 TACTAACGAGGA 107
>seq3012
Length=10011
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||| ||||| ||| | || | ||||| | |||||||||||||||||||||
Sbjct 111 TCCTCGTTAGTATGGTGGTGAGTTTCCCTGCCTGTCCC-CGGGAGACCGGGGTTCGATTC 53
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 52 CCCGACGGGGAG 41
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/72 (88%), Gaps = 2/72 (3%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||| ||||| ||| | || | ||||| | |||||||||||||||||||||
Sbjct 111 TCCTCGTTAGTATGGTGGTGAGTTTCCCTGCCTGTCCC-CGGGAGACCGGGGTTCGATTC 53
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 52 CCCGACGGGGAG 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652223055094160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |