Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 102 2e-16
>seq66148
Length=2144
Score = 102 bits (112), Expect = 2e-16
Identities = 152/215 (71%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| || || || ||||| || || ||||| ||||| || ||
Sbjct 245 AAAATG---CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAG 301
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|||||| | ||| || ||| ||||| || || || ||||| ||| |||
Sbjct 302 CCCAGTGACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCG 361
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
|| || || || ||||||||||| |||||| |||||||||| | || || ||||
Sbjct 362 GATCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGAC 421
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||| ||||||| || || || || || |||||
Sbjct 422 TACAACATCCAGAAGGAATCCACCCTCCATCTTGT 456
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||| ||||||| || ||||
Sbjct 479 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAAGTTGAGCCCAGTGAC 538
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| || ||| ||||| || || || ||||| ||| ||||| ||
Sbjct 539 ACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAG 598
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||||||||| |||||| |||||||||| | || || |||| |||||| ||
Sbjct 599 AGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATC 658
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || || |||||
Sbjct 659 CAGAAGGAGTCCACCCTCCATCTTGT 684
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||| ||||||| || ||||
Sbjct 707 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAAGTTGAGCCCAGTGAC 766
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || ||||| ||| ||||| ||
Sbjct 767 ACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAG 826
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||||||||| |||||| |||||||||| | || || |||| |||||| ||
Sbjct 827 AGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATC 886
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || || ||||| |||||
Sbjct 887 CAGAAGGAATCCACCCTTCATCTTGT 912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1180667140143069
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |