Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq43532 123 8e-25
seq55155 118 3e-23
seq28550 118 3e-23
>seq43532
Length=1968
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1741 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 1800
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 1801 CCCGGGCTTCAGC 1813
>seq55155
Length=30077
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 25678 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 25737
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 25738 CCCGGGCTTCAGC 25750
>seq28550
Length=23212
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 12939 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 12998
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 12999 CCCGGGCTTCAGC 13011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15836392255905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |