Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq43532 123 8e-25 seq55155 118 3e-23 seq28550 118 3e-23 >seq43532 Length=1968 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1741 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 1800 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 1801 CCCGGGCTTCAGC 1813 >seq55155 Length=30077 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 25678 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 25737 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 25738 CCCGGGCTTCAGC 25750 >seq28550 Length=23212 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 12939 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 12998 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 12999 CCCGGGCTTCAGC 13011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15836392255905