Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 134 1e-26
>seq66148
Length=2144
Score = 134 bits (148), Expect = 1e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || ||| ||| | || ||||||||||| || || ||
Sbjct 438 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAG 379
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| |||| ||||| || ||||||||| |||||| ||| | | ||
Sbjct 378 ATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTT 319
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||||| ||||| || || || |||| || ||||||
Sbjct 318 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACA 259
Query 35726 AATATCTGCATT 35737
|| |||||||||
Sbjct 258 AAGATCTGCATT 247
Score = 134 bits (148), Expect = 1e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| ||| | || ||||||||||| || || ||
Sbjct 667 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 608
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||| |||| ||||| || ||||||||| |||||| ||| | | |
Sbjct 607 GATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 548
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | || || |||| ||||| || || ||||||| || |||||
Sbjct 547 TTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 488
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 487 AAAGATCTGCAT 476
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || ||| ||| | || ||||||||||| || || ||
Sbjct 894 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAG 835
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| |||| ||||| || ||||||||| |||||| ||| | | |
Sbjct 834 ATCAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 775
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || || |||| ||||| || || ||||||| || ||||||
Sbjct 774 TCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACA 715
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 714 AAGATCTGCAT 704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450364281080120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |