Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq59062 105 1e-17 >seq59062 Length=24493 Score = 105 bits (116), Expect = 1e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||||| |||||||| ||| | || || || || || ||||| | | | | ||| | Sbjct 3229 CAGATGATTGACGGAGAAATGTATCCACCAACGGTGAAGGACACTCAGGCAGAGATGATC 3288 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| || ||| || ||| | | | || | |||| | ||| ||||||| | Sbjct 3289 TACCCTCCTCACGTGCCTGAACACCTCCAGTTTTCTGTGGGGCAGGAGGTGTTTGGTTTG 3348 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 || || || || ||| ||||||| | || |||||||| || |||||| | || || ||| Sbjct 3349 GTCCCGGGCTTGATGATGTACGCTACAATATGGCTGAGGGAACACAACCGAGTCTGTGAC 3408 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGATCACTCG 214230 | |||||||| ||||| ||||| ||| | ||||| ||||||||||| | ||||| Sbjct 3409 ATCCTGAAACAGGAGCATCCGGAGTGGGATGACGAGCAGCTGTTCCAAACTACTCG 3464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722651917347360