Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq2837 113 6e-20
>seq2837
Length=1096
Score = 113 bits (124), Expect = 6e-20
Identities = 248/369 (67%), Gaps = 2/369 (1%)
Strand=Plus/Minus
Query 14179 CCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCA 14238
|||| || | || ||||| ||| ||| |||||| |||| |||||| | | || ||
Sbjct 369 CCATGTTCACAGGCAACGCGTACATTGTGGTCACACGGGCCTTCGTGCAGCACATCTTCG 310
Query 14239 AGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGC 14298
|| || ||||| | | || | | ||| | ||||||| |||||||| || ||||
Sbjct 309 AGAACCCCACGGTGCAGCAGTTCCTCGAGTGGGCCAAGGACACCTACAGCCCTGATGAGC 250
Query 14299 ACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCA 14358
|| | ||||||||| | | | ||| ||| ||| || | || ||| | | ||
Sbjct 249 ACGTTTGGGCCACCCTCAACCGCATGCCCGGCGTGCCAGGTGCCATGCCCCAAAATGACA 190
Query 14359 AGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGG 14418
||| | | ||| |||||| ||| | | | | ||||||||||| ||| ||||
Sbjct 189 AGTTCCAGCTCTCAGACATGAACGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTGGAGG 130
Query 14419 GGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCT 14478
| || | || || || || | |||||||| ||| |||| ||| | | || |||
Sbjct 129 GCGACACCAGCAAGGGCGCGCCCTACCCGCCCTGCACCGGCCAGCACCAGCGCTCCGTCT 70
Query 14479 GCATCTTCGGGTCCGGCGACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAAC 14537
|||||| |||| ||||||||| |||||| ||| || | ||||| || ||||||
Sbjct 69 GCATCTACGGGGTGGGCGACGTGCCCTGGCTGCTCCAGCATCAC-CACCTCTTAGCCAAC 11
Query 14538 AAGTTCGAC 14546
|||||||||
Sbjct 10 AAGTTCGAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658111841488640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |