Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq2837 113 6e-20 >seq2837 Length=1096 Score = 113 bits (124), Expect = 6e-20 Identities = 248/369 (67%), Gaps = 2/369 (1%) Strand=Plus/Minus Query 14179 CCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCA 14238 |||| || | || ||||| ||| ||| |||||| |||| |||||| | | || || Sbjct 369 CCATGTTCACAGGCAACGCGTACATTGTGGTCACACGGGCCTTCGTGCAGCACATCTTCG 310 Query 14239 AGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGC 14298 || || ||||| | | || | | ||| | ||||||| |||||||| || |||| Sbjct 309 AGAACCCCACGGTGCAGCAGTTCCTCGAGTGGGCCAAGGACACCTACAGCCCTGATGAGC 250 Query 14299 ACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCA 14358 || | ||||||||| | | | ||| ||| ||| || | || ||| | | || Sbjct 249 ACGTTTGGGCCACCCTCAACCGCATGCCCGGCGTGCCAGGTGCCATGCCCCAAAATGACA 190 Query 14359 AGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGG 14418 ||| | | ||| |||||| ||| | | | | ||||||||||| ||| |||| Sbjct 189 AGTTCCAGCTCTCAGACATGAACGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTGGAGG 130 Query 14419 GGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCT 14478 | || | || || || || | |||||||| ||| |||| ||| | | || ||| Sbjct 129 GCGACACCAGCAAGGGCGCGCCCTACCCGCCCTGCACCGGCCAGCACCAGCGCTCCGTCT 70 Query 14479 GCATCTTCGGGTCCGGCGACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAAC 14537 |||||| |||| ||||||||| |||||| ||| || | ||||| || |||||| Sbjct 69 GCATCTACGGGGTGGGCGACGTGCCCTGGCTGCTCCAGCATCAC-CACCTCTTAGCCAAC 11 Query 14538 AAGTTCGAC 14546 ||||||||| Sbjct 10 AAGTTCGAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658111841488640