Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014
-05-08] 76,189 sequences; 1,132,184,511 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq66148 145 2e-29
>seq66148
Length=2144
Score = 145 bits (160), Expect = 2e-29
Identities = 164/217 (76%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || ||||| || || ||||| || || |||||| | ||||| ||
Sbjct 245 AAAATGC---AGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGA- 300
Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
|| ||| ||||||| || || ||||| ||||| |||||||| ||||| || ||||
Sbjct 301 -GCCCAGTGACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTC 359
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
|||| ||||| | || ||||||||||| || ||||| |||||||| | || || |||
Sbjct 360 CGGATCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCG 419
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| || ||| |||| || ||||| || || ||||||||
Sbjct 420 ACTACAACATCCAGAAGGAATCCACCCTCCATCTTGT 456
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || || || || || |||||||| || || || || |||
Sbjct 707 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAAGTTGA--GCCCAGTG 764
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| ||||| ||||| |||||||| ||||| || |||||||| ||||
Sbjct 765 ACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGC 824
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||||||||| || ||||| |||||||| | || || |||| || |||
Sbjct 825 AGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACA 884
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || ||||| || || ||||||||
Sbjct 885 TCCAGAAGGAATCCACCCTTCATCTTGT 912
Score = 136 bits (150), Expect = 1e-26
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || || || || || |||||||| || || || || |||
Sbjct 479 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAAGTTGA--GCCCAGTG 536
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| || || ||||| ||||| |||||||| ||||| || |||||||| ||||
Sbjct 537 ACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGC 596
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||||||||| || ||||| |||||||| | || || |||| || |||
Sbjct 597 AGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACA 656
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || ||||||||
Sbjct 657 TCCAGAAGGAGTCCACCCTCCATCTTGT 684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202556151833666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |