Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq302870 102 1e-16
>seq302870
Length=2297
Score = 102 bits (112), Expect = 1e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| ||||||| ||||| | |||||| || ||||| || |||||||| || ||||| |||
Sbjct 612 AGCCCCGTGACATGGGCAATCATGTACGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 553
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| || || |||||||| || || | ||| || || ||||| || | || || |
Sbjct 552 ACTCCTAGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTCAGA 493
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|| ||||||||||| ||| ||||| || |||| |||||
Sbjct 492 ACATAGAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCAT 452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587801463859200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |