Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq82011 134 1e-26
seq22071 84.2 2e-11
>seq82011
Length=15829
Score = 134 bits (148), Expect = 1e-26
Identities = 98/114 (86%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|||||||||||||| |||||||||||||||||||| || |||||||| || |||| |||
Sbjct 15253 GAGCCGCTGCTGCGGGAGAACCCCCGCCGGTTCGTCATCTTCCCCATCCAGTACCACGAC 15194
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTG 116689
|| |||| |||||||| ||||||||||| || |||||||| | |||||||||
Sbjct 15193 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTG 15140
>seq22071
Length=8576
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| ||||| || || || || ||| ||||||||||||| || || || |||||||
Sbjct 8294 TGGTTGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTT 8353
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| | ||||| ||||| || |||||||| ||| || || || ||| |
Sbjct 8354 GGCTGAAGAAGAGGGGCCTGATGCCTGGATTGACTTTCTCCAATGAACTTATTAGCAGAG 8413
Query 117162 ACGAGG 117167
| ||||
Sbjct 8414 ATGAGG 8419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 513232514764800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |