Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016- 06-02] 308,480 sequences; 997,399,373 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq99764 82.4 7e-11 >seq99764 Length=14086 Score = 82.4 bits (90), Expect = 7e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 |||||||||||||||| ||| || ||||| |||||| ||||| || ||||| ||| Sbjct 9742 CTTTTTGAATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGCTTCCCAGCAAAGA 9801 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCC 118636 | || ||||||||||| ||||| ||||| Sbjct 9802 TCAGGCGCTGCTGATCCGGAGGGATGCC 9829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432199371228160