Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq154869 123 2e-23
>seq154869
Length=4943
Score = 123 bits (136), Expect = 2e-23
Identities = 141/184 (77%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||| || |||| |||||||| |||| |||||||||||| || ||||| ||||| | ||
Sbjct 4446 CATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCCAAATC 4387
Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
|| || || ||| |||| ||| ||| |||||||| || || | ||| ||||| || |
Sbjct 4386 ACCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGGGACCCATTAGCAT 4328
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951
|||| ||||| ||||| || | ||||||||||||| ||||| || || || || || |
Sbjct 4327 CCCAAATCTTCACCCCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 4270
Query 25952 ACAG 25955
||||
Sbjct 4269 ACAG 4266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338858818679040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |