Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016- 06-02] 308,480 sequences; 997,399,373 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq82011 84.2 2e-11 >seq82011 Length=15829 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222 ||||| |||||| |||||||| ||||| |||||| |||||||| || || |||||||| Sbjct 12662 TCCTCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCAC 12721 Query 93223 GGCTGCAAATGCCACAATACGTTC 93246 ||||||||| || || | ||||| Sbjct 12722 GGCTGCAAAGGCTACTACGCGTTC 12745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554713544755200