Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2417 95.1 2e-14
seq82011 84.2 4e-11
>seq2417
Length=632
Score = 95.1 bits (104), Expect = 2e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 68360 TTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAA 68419
||||||||| || ||||| || || ||| |||||||||||| | || || || |
Sbjct 1 TTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCGATGGTGTCATTGGGCTCCACCTCAAG 60
Query 68420 GGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||||| |||||||||||||| ||||| ||||||||
Sbjct 61 GGTGATGGTTTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 102
>seq82011
Length=15829
Score = 84.2 bits (92), Expect = 4e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 10740 ACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGG 10799
||||||||| | |||||||| | ||| ||||||||||||||||||| | |||||| ||
Sbjct 15141 ACCTCCTCCGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 15200
Query 10800 TACCGGATGGGGAA 10813
||| ||||||||||
Sbjct 15201 TACTGGATGGGGAA 15214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918068624025600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |