Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq302870 93.3 4e-14
>seq302870
Length=2297
Score = 93.3 bits (102), Expect = 4e-14
Identities = 103/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| || || ||||| |||| ||| || || | || |||||||||||||| || |||||
Sbjct 612 AGCCCCGTGACATGGGCAATCATGTACGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 553
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC-GTCAGC 20355
||||| | ||||||||||| ||||||||||| || || || || | ||||| ||||
Sbjct 552 ACTCCTAGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTCAG- 494
Query 20356 TACATAAAATTGACA 20370
||||| || || ||
Sbjct 493 AACATAGAACTGGCA 479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 439670866483200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |