Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq59012 86.0 2e-11
seq181449 84.2 9e-11
>seq59012
Length=3606
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| |||||||| | ||||| || || ||||||||||| | || || || |||||
Sbjct 2572 GTTACCAATGCAGTAGTGACTGTCCCAGCCTATTTCAATGACTCCCAGCGCCAGGCAACA 2631
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| ||| || || | || || || |||| || || || || ||||||
Sbjct 2632 AAAGATGCTGGAACTATCGCAGGGCTCAACGTCCTGAGAATCATCAACGAGCCCACAGCA 2691
Query 451433 GCTGC 451437
|||||
Sbjct 2692 GCTGC 2696
>seq181449
Length=4937
Score = 84.2 bits (92), Expect = 9e-11
Identities = 83/107 (78%), Gaps = 3/107 (3%)
Strand=Plus/Minus
Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246
|||| |||||| ||||||| || || | ||||| | || ||||| |||||||||
Sbjct 3214 AAAGCCAAGCCCCATATTCAGGTCGATGTTGGAGGTGGACAGACAAAAACGTTTGCTCCT 3155
Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293
||||||||||| | ||||| || || || ||||| |||||||||||
Sbjct 3154 GAAGAAATTTCTGCAATGGTCCTGACAAAGATGAAGGAAACAGCAGA 3108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1967909570595840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |