Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq22071 82.4 9e-11
>seq22071
Length=8576
Score = 82.4 bits (90), Expect = 9e-11
Identities = 94/124 (76%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145
|||| ||||| ||||| || |||||||| || || || || ||| ||||| | ||||
Sbjct 8297 TTGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCGGGTTCCTT-TGCTGCTATATTTTGG 8355
Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205
|||||||| |||| || ||||| || | ||||| |||||||||||| | |||||
Sbjct 8356 CTGAAGAAGAGGGGCCTGATGCCTGGATTGACTTTCTCCAATGAACTTATTAGCAGAGAT 8415
Query 65206 GAGG 65209
||||
Sbjct 8416 GAGG 8419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594269227622400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |