Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq169471 84.2 6e-11
>seq169471
Length=565
Score = 84.2 bits (92), Expect = 6e-11
Identities = 140/200 (70%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679
||||| || || || || || || || | || || ||||| || |||||||| | |||
Sbjct 176 GTTTTGACGGCCGTGTCGATGAGGCCCTCGCGGCCGCCCATGGCGTGGAAGAAGAACTCG 235
Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738
|| ||| || || | | ||||| |||| ||||| || || |||||| |
Sbjct 236 GTGGG-CGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCCGTA 294
Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798
|||| |||| | ||||| ||||| || | || || ||||| | ||||| ||||| ||
Sbjct 295 GTCGTCCTTGATGAAGTGGGGCAGCGTGCGGTGCTTGAAGCCGAAGGGGATGCGCTTGCC 354
Query 302799 ATCAACGTTCTGCTGTCCCA 302818
|| ||||||||||| ||||
Sbjct 355 CTCCACGTTCTGCTGCCCCA 374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1466000388117760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |