Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq248169 89.7 5e-13
>seq248169
Length=378
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/166 (72%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 138775 GCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTG 138834
|||| ||| ||| ||||| || || || |||||||| || || || ||||| |||
Sbjct 216 GCCAGCTCACAGCTGGCCTCCAGGGCCCCGTAGTAAATGGTCTCAAAGATGTGCTGGTTG 157
Query 138835 AGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGC 138894
|||| |||||| |||||||||| | || | | | || |||| |||||||||||
Sbjct 156 AGCAGCTGGGCCTGGGCGCTCTCGAAGGGGAACCTCATCAGGATGAAGGCGTCGGCCAGG 97
Query 138895 CCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA-CGCT 138939
|| |||||||| | |||| ||||| || ||| | || || ||||
Sbjct 96 CCCTGCACGCCGATGCCGATGGGGCGGTGCCGCCGGTTGGAGCGCT 51
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448162794854400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |