Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016- 06-02] 308,480 sequences; 997,399,373 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq248169 89.7 5e-13 >seq248169 Length=378 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/166 (72%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 138775 GCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTG 138834 |||| ||| ||| ||||| || || || |||||||| || || || ||||| ||| Sbjct 216 GCCAGCTCACAGCTGGCCTCCAGGGCCCCGTAGTAAATGGTCTCAAAGATGTGCTGGTTG 157 Query 138835 AGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGC 138894 |||| |||||| |||||||||| | || | | | || |||| ||||||||||| Sbjct 156 AGCAGCTGGGCCTGGGCGCTCTCGAAGGGGAACCTCATCAGGATGAAGGCGTCGGCCAGG 97 Query 138895 CCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA-CGCT 138939 || |||||||| | |||| ||||| || ||| | || || |||| Sbjct 96 CCCTGCACGCCGATGCCGATGGGGCGGTGCCGCCGGTTGGAGCGCT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448162794854400