Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq302870 93.3 3e-14
>seq302870
Length=2297
Score = 93.3 bits (102), Expect = 3e-14
Identities = 118/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||| || ||||||||||| ||||| || || || ||||| || || |||||
Sbjct 609 CCCGTGACATGGGCAATCATGTACGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 550
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTA-TTTTGTGACAC 111896
||||| ||||| ||||| || || ||||| || || || || | || | || || ||
Sbjct 549 CCTAGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTCAGA-AC 491
Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
||| || || ||||| |||| || |||||||| ||||||
Sbjct 490 ATAGAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCATC 451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 390472041322240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |