Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq248169 127 2e-24
>seq248169
Length=378
Score = 127 bits (140), Expect = 2e-24
Identities = 163/221 (74%), Gaps = 8/221 (4%)
Strand=Plus/Minus
Query 80573 CCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC---GACT 80629
||||||| ||| | | || ||||| ||||||| | | ||||||||||||| | ||
Sbjct 257 CCGGAGAGCCCTGGTAGGTGTCGTAGGGGCCCTGCTCCCTGGCCAGCTCACAGCTGGCCT 198
Query 80630 CCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC-GCGCCTGT 80688
||| ||||| ||| |||||| |||||||| | || ||| | | || | |||||
Sbjct 197 CCA---GGGCCCCGTAGTAAATGGTCTCAAAGATGTGCTGGTTGAG-CAGCTGGGCCTGG 142
Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748
| | ||||| | || | ||||| ||||| |||| ||||||||||| |||||||||
Sbjct 141 GCGCTCTCGAAGGGGAACCTCATCAGGATGAAGGCGTCGGCCAGGCCCTGCACGCCGATG 82
Query 80749 GCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGG 80789
|||| |||||||| ||| ||| || |||||||||| |||
Sbjct 81 CCGATGGGGCGGTGCCGCCGGTTGGAGCGCTCGGCCTGCGG 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568111283097600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |